Last updated on 2026-08-02 13:49:09 CEST.
| Flavor | Version | Tinstall | Tcheck | Ttotal | Status | Flags |
|---|---|---|---|---|---|---|
| r-devel-linux-x86_64-debian-clang | 1.42.2 | 15.00 | 154.52 | 169.52 | NOTE | |
| r-devel-linux-x86_64-debian-gcc | 1.42.2 | 11.97 | 114.71 | 126.68 | NOTE | |
| r-devel-linux-x86_64-fedora-clang | 1.42.2 | 25.00 | 245.18 | 270.18 | NOTE | |
| r-devel-linux-x86_64-fedora-gcc | 1.42.2 | 11.00 | 104.91 | 115.91 | NOTE | |
| r-devel-windows-x86_64 | 1.42.2 | 19.00 | 173.00 | 192.00 | NOTE | |
| r-patched-linux-x86_64 | 1.42.2 | 15.69 | 144.64 | 160.33 | NOTE | |
| r-release-linux-x86_64 | 1.42.2 | 14.04 | 144.18 | 158.22 | NOTE | |
| r-release-macos-arm64 | 1.42.2 | 4.00 | 33.00 | 37.00 | NOTE | |
| r-release-macos-x86_64 | 1.42.2 | 11.00 | 112.00 | 123.00 | ERROR | |
| r-release-windows-x86_64 | 1.42.2 | 18.00 | 177.00 | 195.00 | NOTE | |
| r-oldrel-macos-arm64 | 1.42.2 | ERROR | ||||
| r-oldrel-macos-x86_64 | 1.42.2 | 9.00 | 83.00 | 92.00 | ERROR | |
| r-oldrel-windows-x86_64 | 1.42.2 | 27.00 | 217.00 | 244.00 | NOTE |
Version: 1.42.2
Check: Rd files
Result: NOTE
checkRd: (-1) dkprofile.Rd:64: Lost braces
64 | \doi{10.3389/fphys.2017.00524}{Thiery et al. (2017)}
| ^
checkRd: (-1) dne.Rd:45: Lost braces
45 | \doi{10.1002/ajpa.21489}{Bunn et al. (2011)}
| ^
checkRd: (-1) dne.Rd:47: Lost braces
47 | \doi{10.1007/s10914-016-9326-0}{Pampush et al. (2016)}
| ^
checkRd: (-1) inclin.Rd:28: Lost braces
28 | \doi{10.1371/journal.pone.0066142}{Guy et al. (2013)}
| ^
checkRd: (-1) oedist.Rd:43: Lost braces
43 | \doi{10.1371/journal.pone.0066142}{Guy et al. (2013)}
| ^
checkRd: (-1) oedist.Rd:45: Lost braces
45 | \doi{10.1371/journal.pone.0138802}{Guy et al. (2015)}
| ^
checkRd: (-1) oedist.Rd:47: Lost braces
47 | \doi{10.3389/fphys.2017.00524}{Thiery et al. (2017)}
| ^
checkRd: (-1) oedist.Rd:49: Lost braces
49 | \doi{10.1098/rsbl.2019.0671}{Schwartz et al. (2020)}
| ^
checkRd: (-1) opc.Rd:36: Lost braces
36 | \doi{10.1038/nature05433}{Evans et al. (2007)}
| ^
checkRd: (-1) opcr.Rd:30: Lost braces
30 | \doi{10.1038/nature10880}{Wilson et al. (2012)}
| ^
checkRd: (-1) rfi.Rd:34: Lost braces
34 | \doi{10.1016/j.jhevol.2008.08.002}{Boyer (2008)}
| ^
checkRd: (-1) rfi.Rd:35: Lost braces
35 | \doi{10.1371/journal.pone.0066142}{Guy et al. (2013)}
| ^
checkRd: (-1) rrate.Rd:34: Lost braces
34 | \doi{10.1002/ajpa.23916}{Thiery et al. (2019)}
| ^
checkRd: (-1) shape.index.Rd:44: Lost braces
44 | \doi{10.1029/TR013i001p00350}{Horton (1932)}
| ^
checkRd: (-1) shape.index.Rd:46: Lost braces
46 | \doi{10.1130/0016-7606(1956)67[597:EODSAS]2.0.CO;2}{Schumm (1956)}
| ^
checkRd: (-1) shape.index.Rd:48: Lost braces
48 | \doi{10.2475/ajs.255.2.138}{Chorley et al. (1957)}
| ^
Flavors: r-devel-linux-x86_64-debian-clang, r-devel-linux-x86_64-debian-gcc, r-devel-linux-x86_64-fedora-clang, r-devel-linux-x86_64-fedora-gcc, r-devel-windows-x86_64, r-patched-linux-x86_64, r-release-linux-x86_64, r-release-macos-arm64, r-release-macos-x86_64, r-release-windows-x86_64, r-oldrel-macos-arm64, r-oldrel-macos-x86_64, r-oldrel-windows-x86_64
Version: 1.42.2
Check: for new files in some other directories
Result: NOTE
Found the following files/directories:
‘~/tmp/scratch/Rtmp0x6LJ1’ ‘~/tmp/scratch/Rtmp1E1ljX’
‘~/tmp/scratch/Rtmp1cTdPj’ ‘~/tmp/scratch/Rtmp1l7TxM’
‘~/tmp/scratch/Rtmp1oqubN’ ‘~/tmp/scratch/Rtmp28Phel’
‘~/tmp/scratch/Rtmp4ASql6’ ‘~/tmp/scratch/Rtmp4GZk5i’
‘~/tmp/scratch/Rtmp4VRlv5’ ‘~/tmp/scratch/Rtmp4a76Yr’
‘~/tmp/scratch/Rtmp4xjwqz’ ‘~/tmp/scratch/Rtmp5soMLH’
‘~/tmp/scratch/Rtmp5wUmdn’ ‘~/tmp/scratch/Rtmp6MjkQ8’
‘~/tmp/scratch/Rtmp6V3hfN’ ‘~/tmp/scratch/Rtmp6ZTRxr’
‘~/tmp/scratch/Rtmp7FQDZi’ ‘~/tmp/scratch/Rtmp7iJors’
‘~/tmp/scratch/Rtmp7iVjKQ’ ‘~/tmp/scratch/Rtmp8IX206’
‘~/tmp/scratch/Rtmp96Tzwq’ ‘~/tmp/scratch/Rtmp97HOed’
‘~/tmp/scratch/Rtmp9aXc0N’ ‘~/tmp/scratch/RtmpBHrrYP’
‘~/tmp/scratch/RtmpBaOLQf’ ‘~/tmp/scratch/RtmpBmVA8y’
‘~/tmp/scratch/RtmpBn3ab6’ ‘~/tmp/scratch/RtmpCOV0sv’
‘~/tmp/scratch/RtmpCRqsKw’ ‘~/tmp/scratch/RtmpD365Co’
‘~/tmp/scratch/RtmpDL0bfc’ ‘~/tmp/scratch/RtmpDTSZbe’
‘~/tmp/scratch/RtmpDaCg4O’ ‘~/tmp/scratch/RtmpDkTM97’
‘~/tmp/scratch/RtmpE5GXSk’ ‘~/tmp/scratch/RtmpEmTRvq’
‘~/tmp/scratch/RtmpF8cKaW’ ‘~/tmp/scratch/RtmpFoX5TY’
‘~/tmp/scratch/RtmpFtyWxH’ ‘~/tmp/scratch/RtmpGH6QHA’
‘~/tmp/scratch/RtmpGiOWWy’ ‘~/tmp/scratch/RtmpH6gtzd’
‘~/tmp/scratch/RtmpHNFCrQ’ ‘~/tmp/scratch/RtmpIqwQQ4’
‘~/tmp/scratch/RtmpJ9WDJq’ ‘~/tmp/scratch/RtmpJDoC3j’
‘~/tmp/scratch/RtmpK4sOuX’ ‘~/tmp/scratch/RtmpKDjicW’
‘~/tmp/scratch/RtmpKm0pHl’ ‘~/tmp/scratch/RtmpKqV6B5’
‘~/tmp/scratch/RtmpM1P8dg’ ‘~/tmp/scratch/RtmpMPamTX’
‘~/tmp/scratch/RtmpMohTIt’ ‘~/tmp/scratch/RtmpMvcVNu’
‘~/tmp/scratch/RtmpNGYGEr’ ‘~/tmp/scratch/RtmpNhnGIQ’
‘~/tmp/scratch/RtmpOSZfW7’ ‘~/tmp/scratch/RtmpOeBo1n’
‘~/tmp/scratch/RtmpOp9P3P’ ‘~/tmp/scratch/RtmpOqBJbU’
‘~/tmp/scratch/RtmpP6Gl2u’ ‘~/tmp/scratch/RtmpP94CwN’
‘~/tmp/scratch/RtmpPVk0Tp’ ‘~/tmp/scratch/RtmpPdXI1I’
‘~/tmp/scratch/RtmpPrDLHJ’ ‘~/tmp/scratch/RtmpQLg4Tf’
‘~/tmp/scratch/RtmpSf7ka7’ ‘~/tmp/scratch/RtmpT1TDXL’
‘~/tmp/scratch/RtmpTPZXzh’ ‘~/tmp/scratch/RtmpThcAiY’
‘~/tmp/scratch/RtmpTll8Rf’ ‘~/tmp/scratch/RtmpUfjdI8’
‘~/tmp/scratch/RtmpUu1rA5’ ‘~/tmp/scratch/RtmpV9kvi6’
‘~/tmp/scratch/RtmpVAhdc7’ ‘~/tmp/scratch/RtmpVFLEND’
‘~/tmp/scratch/RtmpWHJbBk’ ‘~/tmp/scratch/RtmpWezpID’
‘~/tmp/scratch/RtmpX4Rjhm’ ‘~/tmp/scratch/RtmpX4v28u’
‘~/tmp/scratch/RtmpXAyEeQ’ ‘~/tmp/scratch/RtmpXzNdIS’
‘~/tmp/scratch/RtmpYkGPke’ ‘~/tmp/scratch/RtmpZl5OSO’
‘~/tmp/scratch/Rtmpa1p9jA’ ‘~/tmp/scratch/RtmpaXFfKJ’
‘~/tmp/scratch/RtmpatVwBa’ ‘~/tmp/scratch/RtmpbR1owk’
‘~/tmp/scratch/RtmpbTqy7c’ ‘~/tmp/scratch/Rtmpbn35dU’
‘~/tmp/scratch/Rtmpbrh31g’ ‘~/tmp/scratch/RtmpcIC4L8’
‘~/tmp/scratch/RtmpcyICrN’ ‘~/tmp/scratch/Rtmpd3WMZs’
‘~/tmp/scratch/RtmpdgEoRR’ ‘~/tmp/scratch/RtmpdnBfxS’
‘~/tmp/scratch/RtmpeExigh’ ‘~/tmp/scratch/RtmpeNrO5O’
‘~/tmp/scratch/RtmpeOuuk1’ ‘~/tmp/scratch/RtmpeWJB5K’
‘~/tmp/scratch/RtmpeX1ulI’ ‘~/tmp/scratch/RtmpfLIBv2’
‘~/tmp/scratch/RtmpfSOE3u’ ‘~/tmp/scratch/Rtmpg7TjO2’
‘~/tmp/scratch/Rtmpgdbfy0’ ‘~/tmp/scratch/Rtmpgk1xmp’
‘~/tmp/scratch/RtmphRk19S’ ‘~/tmp/scratch/Rtmphb13S9’
‘~/tmp/scratch/Rtmpik30ge’ ‘~/tmp/scratch/RtmpjlzYUP’
‘~/tmp/scratch/Rtmpjnz95j’ ‘~/tmp/scratch/RtmpjpLheU’
‘~/tmp/scratch/Rtmpk30SbA’ ‘~/tmp/scratch/Rtmpka63xI’
‘~/tmp/scratch/RtmpkbYq9D’ ‘~/tmp/scratch/Rtmpkpsus8’
‘~/tmp/scratch/Rtmpl1a6to’ ‘~/tmp/scratch/RtmplPIlBr’
‘~/tmp/scratch/RtmplVQszH’ ‘~/tmp/scratch/RtmplZCtx5’
‘~/tmp/scratch/RtmplsSzHX’ ‘~/tmp/scratch/RtmpmBHCet’
‘~/tmp/scratch/RtmpmC4yWd’ ‘~/tmp/scratch/RtmpmUGPnT’
‘~/tmp/scratch/Rtmpmb2D7q’ ‘~/tmp/scratch/RtmpmlG9ML’
‘~/tmp/scratch/RtmpmtElJy’ ‘~/tmp/scratch/RtmpoKKLWp’
‘~/tmp/scratch/RtmpoSFXri’ ‘~/tmp/scratch/RtmpohhIyw’
‘~/tmp/scratch/RtmporOrmk’ ‘~/tmp/scratch/RtmpozKS3R’
‘~/tmp/scratch/RtmprH7P45’ ‘~/tmp/scratch/RtmprVN1bw’
‘~/tmp/scratch/RtmpstOVdb’ ‘~/tmp/scratch/RtmpuHxhDU’
‘~/tmp/scratch/RtmpuJHaA3’ ‘~/tmp/scratch/RtmpvFQOce’
‘~/tmp/scratch/RtmpvXtwp1’ ‘~/tmp/scratch/RtmpvgRhFh’
‘~/tmp/scratch/Rtmpx5rDZn’ ‘~/tmp/scratch/RtmpxEuSQ6’
‘~/tmp/scratch/RtmpxfFmTE’ ‘~/tmp/scratch/RtmpxirWfR’
‘~/tmp/scratch/Rtmpy4HyI9’ ‘~/tmp/scratch/Rtmpy8lvXu’
‘~/tmp/scratch/Rtmpyleg8W’ ‘~/tmp/scratch/RtmpzbDyXm’
‘~/tmp/scratch/RtmpzuBTuZ’ ‘~/tmp/scratch/xvfb-run.0PbIbY’
‘~/tmp/scratch/xvfb-run.1p7A5D’ ‘~/tmp/scratch/xvfb-run.3z38xO’
‘~/tmp/scratch/xvfb-run.4lqTxS’ ‘~/tmp/scratch/xvfb-run.51dbPe’
‘~/tmp/scratch/xvfb-run.5ZhwWH’ ‘~/tmp/scratch/xvfb-run.80hcgZ’
‘~/tmp/scratch/xvfb-run.8CHw7l’ ‘~/tmp/scratch/xvfb-run.9UCKMF’
‘~/tmp/scratch/xvfb-run.CQloCL’ ‘~/tmp/scratch/xvfb-run.EMa8Ph’
‘~/tmp/scratch/xvfb-run.FGLc2r’ ‘~/tmp/scratch/xvfb-run.H63VMl’
‘~/tmp/scratch/xvfb-run.H7K3Kc’ ‘~/tmp/scratch/xvfb-run.HVD4Rc’
‘~/tmp/scratch/xvfb-run.HdhiMr’ ‘~/tmp/scratch/xvfb-run.I1BfFF’
‘~/tmp/scratch/xvfb-run.Ja26VO’ ‘~/tmp/scratch/xvfb-run.LhIp9s’
‘~/tmp/scratch/xvfb-run.OWTr7a’ ‘~/tmp/scratch/xvfb-run.RTf8Kr’
‘~/tmp/scratch/xvfb-run.Sp93DV’ ‘~/tmp/scratch/xvfb-run.VAOh9u’
‘~/tmp/scratch/xvfb-run.WnMQ4Y’ ‘~/tmp/scratch/xvfb-run.aBkSlQ’
‘~/tmp/scratch/xvfb-run.bTvLGI’ ‘~/tmp/scratch/xvfb-run.bcuSsA’
‘~/tmp/scratch/xvfb-run.cSdV3F’ ‘~/tmp/scratch/xvfb-run.cdZ0db’
‘~/tmp/scratch/xvfb-run.eoYqiu’ ‘~/tmp/scratch/xvfb-run.ezpDXc’
‘~/tmp/scratch/xvfb-run.gv9B1M’ ‘~/tmp/scratch/xvfb-run.hKhKU2’
‘~/tmp/scratch/xvfb-run.hWVZae’ ‘~/tmp/scratch/xvfb-run.i9knWP’
‘~/tmp/scratch/xvfb-run.izLhmM’ ‘~/tmp/scratch/xvfb-run.jqmQDN’
‘~/tmp/scratch/xvfb-run.jxqtxw’ ‘~/tmp/scratch/xvfb-run.kWbfEc’
‘~/tmp/scratch/xvfb-run.lAhxP1’ ‘~/tmp/scratch/xvfb-run.lMQu8t’
‘~/tmp/scratch/xvfb-run.lfmPrM’ ‘~/tmp/scratch/xvfb-run.lqf6o9’
‘~/tmp/scratch/xvfb-run.lwBr4M’ ‘~/tmp/scratch/xvfb-run.mioOs7’
‘~/tmp/scratch/xvfb-run.o7pVyX’ ‘~/tmp/scratch/xvfb-run.owzKCF’
‘~/tmp/scratch/xvfb-run.p37VBi’ ‘~/tmp/scratch/xvfb-run.pMSWkS’
‘~/tmp/scratch/xvfb-run.qO9UfR’ ‘~/tmp/scratch/xvfb-run.qhkrpB’
‘~/tmp/scratch/xvfb-run.qtf6Oj’ ‘~/tmp/scratch/xvfb-run.quRoD0’
‘~/tmp/scratch/xvfb-run.t3TkYm’ ‘~/tmp/scratch/xvfb-run.tByD2I’
‘~/tmp/scratch/xvfb-run.tRpTCw’ ‘~/tmp/scratch/xvfb-run.thF3vT’
‘~/tmp/scratch/xvfb-run.ufdw2j’ ‘~/tmp/scratch/xvfb-run.ul5bTE’
‘~/tmp/scratch/xvfb-run.uv8WIz’ ‘~/tmp/scratch/xvfb-run.vqn0No’
‘~/tmp/scratch/xvfb-run.wTjmlq’ ‘~/tmp/scratch/xvfb-run.yHdORB’
‘/dev/shm/sm_segment.gimli1.1001.8fe00000.0’
‘~/.cache/pocl/uncached/tempfile_yyz28A’
Flavor: r-devel-linux-x86_64-debian-gcc
Version: 1.42.2
Check: examples
Result: ERROR
Running examples in ‘doolkit-Ex.R’ failed
The error most likely occurred in:
> ### Name: dkcrop
> ### Title: crop a mesh
> ### Aliases: dkcrop
>
> ### ** Examples
>
> #Crop above a certain threshold:
> mythreshold <- quantile(elev(dkmodel$basin), 0.5)
> mypolynetwork <- poly.network(dkmodel$basin, elev(dkmodel$basin),
+ lwr.limit = mythreshold)
> mynewmesh <- dkcrop(dkmodel$basin, mypolynetwork)
> dkmap(mynewmesh, elev(mynewmesh))
>
> #Crop the sharpest dental elements:
> sharpmesh <- dkcrop(dkmodel$basin, poly.network(dkmodel$basin,
+ Rvcg::vcgCurve(dkmodel$basin)$meanitmax,
+ lwr.limit = quantile(Rvcg::vcgCurve(dkmodel$basin)$meanitmax, 0.8),
+ min.size = 50))
> dkmap(sharpmesh, arc(sharpmesh), col = "arc", col.levels = 20,
+ min.range = -20, max.range = 20)
> #Map of the sharpest elements' elevation, slope and orientation;
> dkmap(sharpmesh, elev(sharpmesh), col = "elev")
Flavor: r-release-macos-x86_64
Version: 1.42.2
Check: examples
Result: ERROR
Running examples in ‘doolkit-Ex.R’ failed
The error most likely occurred in:
> ### Name: dkcrop
> ### Title: crop a mesh
> ### Aliases: dkcrop
>
> ### ** Examples
>
> #Crop above a certain threshold:
> mythreshold <- quantile(elev(dkmodel$basin), 0.5)
> mypolynetwork <- poly.network(dkmodel$basin, elev(dkmodel$basin),
+ lwr.limit = mythreshold)
> mynewmesh <- dkcrop(dkmodel$basin, mypolynetwork)
> dkmap(mynewmesh, elev(mynewmesh))
Flavors: r-oldrel-macos-arm64, r-oldrel-macos-x86_64